OliveAtlas aims to provide interactive bioinformatics tools to explore gene expression data of olive tree. The current version of OliveAtlas includes data for most of the main organs of the olive tree variety Picual (leaves, flower, pollen, fruits, seeds, roots, stem, and meristem), and multiple responses to biotic and abiotic stresses such as cold, wound and infection of Verticillium dahliaea.

All the Picual expression data were analyzed based on the olive tree genome sequence published by Jiménez-Ruiz et al., 2020 and all data are linked to sequences and annotations available at the OliveTreeDB.

OliveAtlas was developed by researchers from three Spanish research centers: the Institute for Mediterranean and Subtropical Horticulture "La Mayora" (IHSM-UMA-CSIC), the Estación Experimental del Zaidín (EEZ-CSIC) and the University Institute of Research on Olive Grove and Olive Oils (INUOUJA).

Please, Contact us if you have any question or request, or if you are interested in the addition of new data.

IHSM-UMA-CSIC

EEZ-CSIC

INUOUJA

Funding

This project was possible thanks to the next funding agencies and projects: Junta de Andalucía (EMERGIA20_00286, P18-RT-1577, PYC20 RE 009 CSIC. EEZ y UMA20-FEDERJA-029), and Ministerio de Ciencia e Innovación (MICINN) (RYC2020-030219-I, PID2021-125805OA-I00, 20224AT004, PID2020-113324GB-100, TED2021-130015B-C21 and TED2021-130015B-C22).

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